Coccidiosis is an intestinal tract infection caused by a single-celled organism (protozoa) called coccidia. Coccidiosis typically refers to gastrointestinal infections with the Isospora species (sometimes called Cystoisospora) of coccidia, though other species can be found.

Coccidiosis is caused by protozoan parasites from the genus Eimeria. These parasites are host-specific, and many species occupy a specific segment of the intestinal tract. Coccidiosis may be one of the most common diseases affecting small flocks around the world, causing loss in performance and even mortality.

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